This issue should be resolved with patch 0.3.0. If you continue to experience this issue, please reach out to us through our support site to let us know.
There is a furniture desync currently happening in the game. This can cause storage containers and other building objects to move around the house, change floors in a base, move outside or inside on their own, or even clump together in a single location.
PC, Xbox One
Exiting the game session and rejoining may resync you to the host.